1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
|
<?xml version="1.0" ?>
<!DOCTYPE book PUBLIC "-//KDE//DTD DocBook XML V4.2-Based Variant V1.1//EN" "dtd/kdex.dtd" [
<!ENTITY kappname "&kalzium;"><!-- replace kapp here -->
<!ENTITY package "kdeedu">
<!ENTITY % addindex "IGNORE">
<!ENTITY % English "INCLUDE"><!-- change language only here -->
]>
<book lang="&language;">
<bookinfo>
<title>The &kalzium; Handbook</title>
<authorgroup>
<author>
<firstname>Carsten</firstname>
<surname>Niehaus</surname>
<affiliation>
<address><email>&Carsten.Niehaus.mail;</email></address>
</affiliation>
</author>
<!-- TRANS:ROLES_OF_TRANSLATORS -->
</authorgroup>
<copyright>
<year>2001</year>
<year>2002</year>
<year>2004</year>
<year>2005</year>
<holder>&Carsten.Niehaus;</holder>
</copyright>
<copyright>
<year>2005</year>
<holder>&Anne-Marie.Mahfouf;</holder>
</copyright>
<legalnotice>&FDLNotice;</legalnotice>
<date>2005-08-21</date>
<releaseinfo>1.4.2pre4</releaseinfo>
<abstract>
<para>&kalzium; is a program which shows you the Periodic Table of
Elements. You can use &kalzium; to search for information about the elements or to learn facts about the
periodic table.</para>
</abstract>
<keywordset>
<keyword>KDE</keyword>
<keyword>education</keyword>
<keyword>elements</keyword>
<keyword>chemistry</keyword>
<keyword>education</keyword>
<keyword>kalzium</keyword>
</keywordset>
</bookinfo>
<chapter id="introduction">
<title>Introduction</title>
<para>&kalzium; provides you with all kinds of information about the
Periodic Table of the Elements. You can lookup
lots of information about the elements and also use visualizations to
show them. It is free and licensed
under the &GNU; Public License.
</para>
<para>
You can visualize the Periodic Table of the Elements by groups, blocks, acidic
behavior, families, crystal structure or different states of matter. You can
plot data for a range of elements for properties like the density or the
atomic mass. You can go back in time and see what elements were known at a
given date. You can also calculate the molecular mass of molecules.
</para>
</chapter>
<chapter id="quick-start">
<title>&kalzium; quick start guide</title>
<para>Here is &kalzium; the first time you run it, either from the K menu->Edutainment->Science->&kalzium; or with <keycombo action="simul">&Alt;<keycap>F2</keycap></keycombo> and entering <command>kalzium</command> into the field.</para>
<screenshot>
<screeninfo>&kalzium; main window</screeninfo>
<mediaobject>
<imageobject><imagedata fileref="quick-1.png" format="PNG" /></imageobject>
<textobject><phrase>&kalzium; main window</phrase></textobject>
</mediaobject>
</screenshot>
<para>
&kalzium; is divided in a sidebar on the left (in red, 1) and the table view (in blue, 2) which shows the elements of the periodic table. The standard menubar allows you to choose what you want to display and the status bar reports facts. You can hide the sidebar using the <menuchoice> <guimenu>View</guimenu> <guimenuitem>Hide Sidebar</guimenuitem> </menuchoice> menu.
</para>
<para>
When you move the mouse cursor on an element of the table, a tooltip appears with a picture of this element if available, its number and its mass. In the sidebar is displayed an overview of the current element in the <guilabel>Overview</guilabel> tab.
</para>
<para>You can disable the tooltips using the <menuchoice> <guimenu>View</guimenu> <guimenuitem>Hide tooltip</guimenuitem> </menuchoice> menu.
</para>
<para>
You can choose several views for the table: display the elements per families, per groups, per crystal structure, depending on their acidic behaviour, &etc;. You can change all that in the menubar in the <menuchoice> <guimenu>View</guimenu> <guimenuitem>Look</guimenuitem> </menuchoice> menu.
</para>
<para>
If you want to know facts about a precise element, click on it in the table and the information dialog will be displayed.
</para>
<screenshot>
<screeninfo>Information dialog</screeninfo>
<mediaobject>
<imageobject><imagedata fileref="infodialog_overview.png" format="PNG" /></imageobject>
<textobject><phrase>Information dialog</phrase></textobject>
</mediaobject>
</screenshot>
<para>You can plot data using the <menuchoice> <guimenu>Tools</guimenu>
<guimenuitem>Plot Data</guimenuitem> </menuchoice> menu. You choose
what you want to plot on the y -axis and a range of elements to plot
taht for on the x-axis. The screenshot below shows the mass of the
elements 1 to 111. </para>
<screenshot>
<screeninfo>The Plot Data dialog</screeninfo>
<mediaobject>
<imageobject><imagedata fileref="plottingdialog.png" format="PNG" /></imageobject>
<textobject><phrase>The Plot Data dialog</phrase></textobject>
</mediaobject>
</screenshot>
<para>The Glossary (<menuchoice> <guimenu>Tools</guimenu> <guimenuitem>Glossary</guimenuitem> </menuchoice>) explains the most important chemical words and shows you pictures of the most common tools along with an explanation.</para>
<screenshot>
<screeninfo>The Glossary</screeninfo>
<mediaobject>
<imageobject><imagedata fileref="screenshot7.png" format="PNG" /></imageobject>
<textobject><phrase>The Glossary</phrase></textobject>
</mediaobject>
</screenshot>
</chapter>
<chapter id="using-kalzium">
<title>Using &kalzium;</title>
<sect1 id="foo"><title>Overview of Kalziums usage</title>
<para>Here are some screenshots of &kalzium; in action:</para>
<para>&kalzium; is very easy to use. It is specially designed for students of all ages to use as a small and quick database.</para>
<screenshot>
<screeninfo>&kalzium; main screen, immediately after the first start</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="screenshot1.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; main screen</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect1>
<sect1 id="info-dlg">
<title>The information dialog</title>
<para>The information dialog is accessed by clicking with the &LMB; on
any element. It is available only in the
<guilabel>Overview</guilabel> mode or when the sidebar is hidden.
This is the place to get information about an element. With the
buttons at the bottom of the dialog or with the use of the mousewheel
you can change the element which is displayed without closing the
dialog.</para>
<sect2 id="infodialog_overview">
<title>Overview</title>
<para>In the <guilabel>Overview</guilabel> you will find the most
important information about the element. In the middle you see the
symbol of the Element with it's elemental number in the top left.
The bottom-left corner displays the name of the element while the
bottom-right corner shows the most important oxidation-stages and,
below that, the elemental weight</para>
<screenshot>
<screeninfo>&kalzium; information dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="infodialog_overview.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; information dialog</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="infodialog_picture">
<title>Picture</title>
<para>The <guilabel>Picture</guilabel> tab displays a picture of the element when available.</para>
<screenshot>
<screeninfo>&kalzium; information dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="infodialog_picture.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; information dialog</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="infodialog_orbits">
<title>Bohr Orbitals</title>
<para>The <guilabel>Atom Model</guilabel> tab displays the atomic
shells. Every orbit stands for a atomic shell and every yellow
circle represents an electron.</para>
<screenshot>
<screeninfo>&kalzium; information dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="infodialog_bohr.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; information dialog</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="infodialog_chemical">
<title>Chemical Data</title>
<para>
The <guilabel>Chemical Data</guilabel> tab presents some atomic
data. The first entry is the <guilabel>Orbital structure</guilabel>. The next is the
<guilabel>density</guilabel>.
</para>
<para> Depending on the data available in &kalzium; you will see
different radii of the element. The covalent radius is the radius
of a non charged atom of the element in a molecule. The could for
example be the O-H-distance in Water. The atomic radius is the
radius of an elemental atom, ⪚ not bound to anything. The van der
Waals-radius is defined as the distance of two atoms of the same
sort in two equal molecules, for example two carbon-atoms in
propane. The last possible radius is the ionic radius including its
charge.</para>
<para>The mass of an element is the avarage mass of all isotopes in
relation to their percentage.
</para>
<para>
Some elements have information about their isotopes.
<variablelist>
<varlistentry>
<term>Mass</term>
<listitem><para>
The mass of this isotope.
</para></listitem>
</varlistentry>
<varlistentry>
<term>Neutrons</term>
<listitem><para>
The number of neutrons this isotope has.
</para></listitem>
</varlistentry>
<varlistentry>
<term>Percentage</term>
<listitem><para>
The percentage of atoms occuring that are of this isotope type. Also called abundance.
</para></listitem>
</varlistentry>
<varlistentry>
<term>Half-life period</term>
<listitem><para>
Only unstable isotopes have a half-life period. It is defined as the time in which half the isotopes decay.
</para></listitem>
</varlistentry>
<varlistentry>
<term>Energy and Mode of Decay</term>
<listitem><para>
Some isotopes are known to emit particle radiation under the process of radioactive decay. Each decay transformation has a
typical energy release, which is listed along with the mode of decay.
</para></listitem>
</varlistentry>
<varlistentry>
<term>Spin and parity</term>
<listitem><para>
The spin of the nucleus and its parity.
</para></listitem>
</varlistentry>
<varlistentry>
<term>Magnetic Moment</term>
<listitem><para>
The magnetic dipolemoment of the nucleus. Measured in units of the nuclear magneton.
</para></listitem>
</varlistentry>
</variablelist>
</para>
<screenshot>
<screeninfo>&kalzium; information dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="infodialog_chemicaldata.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; information dialog</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="infodialog_misc">
<title>Miscellaneous</title>
<para>The <guilabel>Miscellaneous</guilabel> tab tells you other
informations about the current element, including when it was
discovered, its abundance in crustal rocks, its mean mass (the mass per neutron) and the origin of the name.</para>
<screenshot>
<screeninfo>&kalzium; information dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="infodialog_misc.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; information dialog</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="infodialog_energies">
<title>Chemical Energies</title>
<para>The <guilabel>Energies</guilabel> tab tells you about different
energy facts related to the element.</para>
<screenshot>
<screeninfo>&kalzium; information dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="infodialog_energies.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; information dialog</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="infodialog_spectrum">
<title>Spectrum</title>
<para>If &kalzium; has information about the emission-spectrum of
the current element, this page will display it at the top. The displayed wavelength increases from left to
right. The wavelength between 380
nanometer (nm) and 780 nm have the colors of the visual light
spectrum. For example, 550 nm is the color green.</para>
<para>There are two ways to zoom into the spectrum. With the
spinboxes displayed right below the spectrum, the first and the last
wavelength of the spectrum are defined. Furthermore, you can hold
the left mouse button pressed whilst moving the mouse cursor over the spectrum. You will see
the area in which &kalzium; would zoom into marked with a white line.
Once you release the left mouse button, &kalzium; will zoom into
the selected area.</para>
<para>At the bottom of the page is the <guilabel>Export Spectrum as
Image</guilabel>-button. With it you can save the current spectrum
as an image file.</para>
<para>To zoom out of the view by 10% press the right mouse button while
the mouse is inside the spectrum.</para>
<screenshot>
<screeninfo>&kalzium; information dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="infodialog_spectrum.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>&kalzium; information dialog</phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
</sect1>
<!-- Don't have empty chapters if possible - comment them out until -->
<sect1 id="numeration">
<title>Numeration</title>
<para>The numeration is the way of numbering the 18 groups of the periodic table. You can change the numeration to
<guilabel>IUPAC</guilabel>, <guilabel>old IUPAC</guilabel> or
<guilabel>CAS</guilabel>, or you can switch it off entirely.</para>
<para>The following options in the <guimenu>View</guimenu> <guimenuitem>Numeration</guimenuitem> menu can be used to change the numeration shown:
<itemizedlist>
<listitem><para>
<guimenuitem>No Numeration</guimenuitem>: if this option is active, no period-numeration will be
in effect.</para></listitem>
<listitem><para>
<guimenuitem>Show IUPAC</guimenuitem> (default): the <acronym>IUPAC</acronym> is the <firstterm>International
Union of Pure and Applied Chemistry</firstterm>. This is an
organization which defines most of the standards for chemical
concerns. The new IUPAC system numbers each column with Arabic numbers from 1 (one) through 18 (eighteen).
</para></listitem>
<listitem><para>
<guimenuitem>Show CAS</guimenuitem>: the <acronym>CAS</acronym> is the <firstterm>Chemical Abstracts
Service</firstterm>. In the CAS system the letters A and B were designated to main group elements (A) and transition elements (B). Though the <acronym>IUPAC</acronym> numeration
is the official, the <acronym>CAS</acronym> numeration is what is still
used in classrooms and laboratories.</para></listitem>
<listitem><para>
<guimenuitem>Show Old IUPAC</guimenuitem>: the old IUPAC system labeled columns with Roman numerals followed by either the letter <quote>A</quote> or <quote>B</quote>. Columns were numbered such that columns one through seven were numbered <quote>IA</quote> through <quote>VIIA</quote>, columns 8 through 10 were labeled <quote>VIIIA</quote>, columns 11 through 17 were numbered <quote>IB</quote> through <quote>VIIB</quote> and column 18 was numbered <quote>VIII</quote>. Because of the confusion the old IUPAC and the CAS system created, the IUPAC adopted their new system.
</para></listitem>
</itemizedlist>
</para>
</sect1>
<sect1 id="colors">
<title>Color schemes</title>
<para>&kalzium; can show you which elements are where with regard to their Periodic <quote>block</quote> and <quote>group</quote>, their behavior with acid and which state of matter (&ie; solid/liquid/vapor) they are in at a given temperature.</para>
<para>Color schemes can be changed in the <guimenu>View</guimenu> <guimenuitem>Look</guimenuitem> menu. </para>
<itemizedlist>
<listitem><para>
<guimenuitem>No Color Scheme</guimenuitem>: all the elements have the same color. You can change the default color by choosing <menuchoice><guimenu>Settings</guimenu><guimenuitem>Configure &kalzium;...</guimenuitem>
</menuchoice> and going to the <guilabel>Colors</guilabel> tab.
</para></listitem>
<listitem><para>
<guimenuitem>Show Groups</guimenuitem>: displays a color for each group. A group is a vertical column in the periodic table of the elements. There are 18 groups in the standard periodic table. Elements in a group have similar configurations of their valence shell electrons, which gives them similar properties.
</para></listitem>
<listitem><para>
<guimenuitem>Show Blocks</guimenuitem>: displays a color for each block.
</para></listitem>
<listitem><para>
<guimenuitem>Show Acid Behavior</guimenuitem>: represents each acidic behaviour with a different color.
</para></listitem>
<listitem><para>
<guimenuitem>Show Family</guimenuitem>: represents each of the nine families with a color.
</para></listitem>
<listitem><para>
<guimenuitem>Show Crystal Structures</guimenuitem>: colors each element depending on its crystal structure.
</para></listitem>
<listitem>
<para><guimenuitem>Gradient</guimenuitem></para>
<para>The gradient views displays the elements according to a property you can select below and with a gradient colored scheme. The elements for which the data is not available are displayed in grey.</para>
<screenshot>
<screeninfo>Gradient for Covalent Radius</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="gradient.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>Gradient for Covalent Radius</phrase>
</textobject>
</mediaobject>
</screenshot>
<itemizedlist>
<listitem><para><guimenuitem>Atomic Radius</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>Covalent Radius</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>van der Waals Radius</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>Atomic Mass</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>Density</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>Boiling Point</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>Melting Point</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>Electronegativity</guimenuitem>
</para></listitem>
<listitem><para><guimenuitem>Electron Affinity</guimenuitem>
</para></listitem>
</itemizedlist>
</listitem>
</itemizedlist>
</sect1>
<sect1 id="tools">
<title>Tools</title>
<sect2 id="glossary">
<title>Glossary</title>
<para>The Glossary gives you definitions of the most used tools in chemistry as well as some knowledge data. On the left side of the windows you can see the tree of items. On top, there are chemical terms, below that there is a second tree of labaratory-tools. </para>
<para>On the top of the widget you can see a searchbar. If you type in the bar the trees will be adjusted immediately. The small button left of the searchbar will clear it.
</para>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="screenshot7.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>the <quote>Glossary</quote></phrase>
</textobject>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="plot_data">
<title>Plot Data</title>
<para>
The <guimenuitem>Plot Data</guimenuitem> dialog allows you to plot some information about elements. The X-axis represents a range of elements (from one number to a higher number). You set this range using the <guilabel>First Element</guilabel> and <guilabel>Last Element</guilabel> fields on the dialog. The display does not change until you click on the <guibutton>Plot</guibutton> button.
</para>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="plottingdialog.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>the <quote>Plot Data</quote> Dialog</phrase>
</textobject>
<caption><para>&kalzium; can plot some data about a range of elements.</para>
</caption>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="eq_solver">
<title>Equation Solver</title>
<para>
The <guimenuitem>Equation Solver</guimenuitem> enables the user to solve chemical equations. This is an example:
</para>
<blockquote><para>aH2O + bCO2 -> cH2CO3</para></blockquote>
<para>
The computed equation will be displayed on the right side of the window. As you can see in the first example you can also define the value of one or more coefficients. The other coefficients will be ajusted. Furthermore, it is possible to use brackets around elements or electronic charges as shown in the last two examples.</para>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="screenshoteqsolver.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>the <quote>Equation Solver</quote> Dialog</phrase>
</textobject>
<caption><para>&kalzium; can solve chemical equations</para>
</caption>
</mediaobject>
</screenshot>
</sect2>
<sect2 id="sidebar">
<title>Sidebar</title>
<sect3 id="overview">
<title>Overview</title>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="sidebar1.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>Overview</phrase>
</textobject>
</mediaobject>
</screenshot>
<para>The Overview tab is the first one and it shows you an overview of the element the mouse is over.</para>
<para>
<variablelist>
<varlistentry>
<term>Full red circle</term>
<listitem><para>
Element is essential to all species
</para></listitem>
</varlistentry>
<varlistentry>
<term>Full green circle</term>
<listitem><para>
Element is essential for at least one species
</para></listitem>
</varlistentry>
<varlistentry>
<term>Full blue circle</term>
<listitem><para>
Biological function is proposed
</para></listitem>
</varlistentry>
<varlistentry>
<term>Red outer circle</term>
<listitem><para>
Element is essential for humans
</para></listitem>
</varlistentry>
<varlistentry>
<term>Blue outer circle</term>
<listitem><para>
Element is probably essential for humans
</para></listitem>
</varlistentry>
</variablelist>
</para>
</sect3>
<sect3 id="calculate">
<title>Calculate</title>
<para>The Calculate tab is the second in the sidebar. It alows you to calculate molecules weights.</para>
<para>You are first presented with the following:</para>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="sidebar2.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>Calculate</phrase>
</textobject>
<caption><para>The calculator when it is started.</para>
</caption>
</mediaobject>
</screenshot>
<para>In this example, the mass of ethyl alcohol (regular
alcohol) H<subscript>3</subscript>CH<subscript>2</subscript>OH will be calculated. For this, simply enter the formula in the lineedit
and either press enter or click on the
<guibutton>Calc</guibutton>-button. The result of the calculation
will be displayed below.</para>
<para>As you can see you will get several answers. For one, on top
of the widget you will see the empirical formula,
H<subscript>6</subscript>C<subscript>1</subscript>O<subscript>1</subscript>. At the
bottom of the widget there is a list of elements and their
abundance in the entered molecule and finally the mass of the
molecule.</para>
<para>The tooltip of the widget will show you the relativ masses of
the elements in the molecule. In this example, the six hydrogen
have only 17.76% of the mass of the molecule.</para>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="sidebar3.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>The result of the calculation.</phrase>
</textobject>
<caption><para>The result of the calculation.</para>
</caption>
</mediaobject>
</screenshot>
</sect3>
<sect3 id="timeline">
<title>Timeline</title>
<para>The Timeline feature allows you to explore the elements of the
set time period. This is great for getting a feel for how the PSE
evolved over time, as more and more elements were discovered. If you move the slider you will
notice that some elements disappear if you move it to the left and
reappear if you move it to the right. Furthermore the number will
change constantly.</para>
<para>
The number represents the date you are looking at. If you move the slider
to ⪚ 1891 you will only see the elements which where known in the
year 1891.
</para>
<para>
You will notice that some elements are not even shown in the current year.
This is because some of the elements have not been discovered yet but are
predicted to exist.
</para>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="timeline.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>the <quote>Timeline</quote></phrase>
</textobject>
<caption><para>The PSE back in time (elements known in 1891)</para>
</caption>
</mediaobject>
</screenshot>
</sect3>
<sect3 id="state_of_matter">
<title>State of Matter</title>
<para>
With the State of Matter function, you can choose a temperature and view the state of each element at that temperature. You can easily visualize how many elements and what elements are, for example, solid at a given temperature. So you can learn that almost all are solid at very low temperatures and that most are liquid or even vaporous at high temperatures.
</para>
<screenshot>
<mediaobject>
<imageobject>
<imagedata fileref="screenshot2.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>the <quote>State of Matter</quote> Dialog</phrase>
</textobject>
<caption><para>&kalzium; can show you which elements are
solid/liquid/vaporous at a given temperature.</para>
</caption>
</mediaobject>
</screenshot>
</sect3>
<sect3 id="show_hide_legend">
<title>Show/Hide Legend</title>
<para>The Show/Hide Legend action allows you to display the legend for the scheme you are in (Groups, Blocks, Acid Behavior). The legend is displayed by default but if you hide it, it will stay hidden until you choose to show it. &kalzium; will keep this setting in its configuration file, so that the next time you run it, the setting will be as you left it.
</para>
</sect3>
</sect2>
</sect1>
</chapter>
<chapter id="config">
<title>Configuring &kalzium;</title>
<para>
&kalzium; has many configuration options, which you can access by opening
the configuration dialog by selecting <menuchoice> <guimenu>Settings</guimenu> <guimenuitem>Configure
&kalzium;...</guimenuitem> </menuchoice> from the menu.</para>
<screenshot>
<screeninfo>Configure &kalzium; Dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="settings1.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>Colors</phrase>
</textobject>
</mediaobject>
</screenshot>
<para>In the <guilabel>Colors</guilabel> tab, you can change the different
colors for each scheme.
</para>
<screenshot>
<screeninfo>Configure &kalzium; Dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="settings2.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>Units</phrase>
</textobject>
</mediaobject>
</screenshot>
<para>In the <guilabel>Units</guilabel> tab, you can
choose the units. You can select if you prefer kJ/mol by default or
you can choose eV. The temperature is in Kelvin by default but you can
change to degrees Celsius, degrees Fahrenheit, Reamur or Rankine. The
last two units are not often used today but can still be found
sometimes. Furthermore, they teach us, that temperatures are nothing
absolut. It doesn't matter, which unit you are using.
</para>
<screenshot>
<screeninfo>Configure &kalzium; Dialog</screeninfo>
<mediaobject>
<imageobject>
<imagedata fileref="settings3.png" format="PNG"/>
</imageobject>
<textobject>
<phrase>Miscellaneous</phrase>
</textobject>
</mediaobject>
</screenshot>
<para>In the <guilabel>Miscellaneous</guilabel> tab, you can find other options not
related with the previous tabs.
</para>
</chapter>
<chapter id="commands">
<title>Command Reference</title>
<sect1 id="kalzium-mainwindow">
<title>Menus and shortcut keys</title>
<sect2>
<title>The <guimenu>File</guimenu> Menu</title>
<variablelist>
<varlistentry>
<term><menuchoice>
<shortcut>
<keycombo action="simul">&Ctrl;<keycap>Q</keycap></keycombo>
</shortcut>
<guimenu>File</guimenu>
<guimenuitem>Quit</guimenuitem>
</menuchoice></term>
<listitem><para><action>Quits</action> &kalzium;</para></listitem>
</varlistentry>
</variablelist>
</sect2>
<sect2>
<title>The <guimenu>View</guimenu> Menu</title>
<variablelist>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Numeration</guisubmenu>
<guimenuitem>No Numeration</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> no numeration scheme</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Numeration</guisubmenu>
<guimenuitem>Show IUPAC</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the IUPAC numeration</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Numeration</guisubmenu>
<guimenuitem>Show CAS</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the CAS numeration</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Numeration</guisubmenu>
<guimenuitem>Show Old IUPAC</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the Old IUPAC numeration</para></listitem>
</varlistentry>
<!-- second entry -->
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>No Color Scheme</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> no color scheme</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Show Groups</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the groups of elements</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Show Blocks</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the four blocks of
elements</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Show Acid Behaviour</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the acidic behaviour</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Show Families</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the familes of
elements</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Show Crystal Structures</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> crystal structures</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Atomic Radius</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements atomic radius</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Covalent Radius</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements covalent radius</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>van der Waals Radius</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements van der Waals radius</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Atomic Mass</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements atomic radius</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Density</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements atomic radius</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Boiling Point</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements boiling point</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Melting Point</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements melting point</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Electronegativity</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements electronegativity</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guisubmenu>Look</guisubmenu>
<guimenuitem>Gradient</guimenuitem>
<guimenuitem>Electron Affinity</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the elements electron affinity</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guimenuitem>Show/Hide Legend</guimenuitem>
</menuchoice></term>
<listitem><para><action>Toggle</action> the legend view</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guimenuitem>Show/Hide Tooltip</guimenuitem>
</menuchoice></term>
<listitem><para><action>Toggle</action> tooltip display on elements</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>View</guimenu>
<guimenuitem>Show/Hide Sidebar</guimenuitem>
</menuchoice></term>
<listitem><para><action>Toggle</action> the Sidebar</para></listitem>
</varlistentry>
</variablelist>
</sect2>
<sect2>
<title>The <guimenu>Tools</guimenu> Menu</title>
<variablelist>
<!--<varlistentry>
<term><menuchoice>
<guimenu>Miscellaneous</guimenu>
<guimenuitem>Show/Hide Timeline</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the Timeline Slider</para></listitem>
</varlistentry>-->
<varlistentry>
<term><menuchoice>
<guimenu>Tools</guimenu>
<guimenuitem>Plot Data</guimenuitem>
</menuchoice></term>
<listitem><para><action>Open</action> the Plot Data dialog</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>Tools</guimenu>
<guimenuitem>Glossary</guimenuitem>
</menuchoice></term>
<listitem><para><action>Open</action> the Glossary</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>Tools</guimenu>
<guimenuitem>Show Equationsolver</guimenuitem>
</menuchoice></term>
<listitem><para><action>Open</action> the Equationsolver dialog</para></listitem>
</varlistentry>
<!--<varlistentry>
<term><menuchoice>
<guimenu>Miscellaneous</guimenu>
<guimenuitem>Show/Hide State Of Matter</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the State Of Matter dialog</para></listitem>
</varlistentry>-->
</variablelist>
</sect2>
<sect2>
<title>The <guimenu>Settings</guimenu> Menu</title>
<variablelist>
<varlistentry>
<term><menuchoice>
<guimenu>Settings</guimenu>
<guimenuitem>Show/Hide Toolbar</guimenuitem>
</menuchoice></term>
<listitem><para><action>Toggle</action> the Main Toolbar</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>Settings</guimenu>
<guimenuitem>Show/Hide Statusbar</guimenuitem>
</menuchoice></term>
<listitem><para><action>Toggle</action> the Statusbar</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>Settings</guimenu>
<guimenuitem>Configure Shortcuts...</guimenuitem>
</menuchoice></term>
<listitem><para><action>Configure</action> the keyboard keys you use to access the different actions.</para>
</listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>Settings</guimenu>
<guimenuitem>Configure Toolbars...</guimenuitem>
</menuchoice></term>
<listitem><para><action>Configure</action> the items you want to put in the toolbar
</para></listitem>
</varlistentry>
<varlistentry>
<term><menuchoice>
<guimenu>Settings</guimenu>
<guimenuitem>Configure &kalzium;...</guimenuitem>
</menuchoice></term>
<listitem><para><action>Display</action> the &kalzium; settings dialog
</para></listitem>
</varlistentry>
</variablelist>
</sect2>
<sect2>
<title>The <guimenu>Help</guimenu> Menu</title>
&help.menu.documentation;
</sect2>
</sect1>
</chapter>
<chapter id="faq">
<title>Questions and Answers</title>
<qandaset id="faqlist">
<qandaentry>
<question>
<para>Will I ever have to pay for &kalzium;?</para>
</question>
<answer>
<para>No, never. But the author always welcomes a nice mail or a
DVD as a <quote>Thank You</quote>. &kalzium; is licensed
under the <ulink url="http://www.gnu.org/licenses/licenses.html#GPL">GPL</ulink>, so you will never have to pay for this program.</para>
</answer>
</qandaentry>
<qandaentry>
<question>
<para>Will there ever be a &Windows; version?</para>
</question>
<answer>
<para>No, at the moment not, but you can download the source and make
your own &Windows; version. It should not be a big problem, because it is
written with Trolltech &Qt; libs. But what do you need &Windows; for?
Get the latest &Linux;, and live on the edge.</para>
</answer>
</qandaentry>
</qandaset>
</chapter>
<chapter id="contribute">
<title>How can I contribute?</title>
<qandaset id="tasks">
<qandaentry>
<question>
<para>Support me with data.</para>
</question>
<answer>
<para>In the world of science, the progress is quite fast. If you
ever find an incorrect or missing value, please drop me
an email.</para>
</answer>
</qandaentry>
<qandaentry>
<question>
<para>Find some bugs or give some suggestions</para>
</question>
<answer>
<para>
If you find any bugs in the program, or have a few suggestions for
improvements, please let me know at <email>&Carsten.Niehaus.mail;</email>.
</para>
</answer>
</qandaentry>
</qandaset>
</chapter>
<chapter id="credits">
<title>Credits and License</title>
<para>&kalzium;</para>
<para>
Program Copyright, 2001-2005 &Carsten.Niehaus;
<email>&Carsten.Niehaus.mail;</email>
</para>
<para> Contributors:</para>
<itemizedlist>
<listitem><para>
Pino Toscano <email>toscano.pino@tiscali.it</email>
</para></listitem>
</itemizedlist>
<itemizedlist>
<listitem><para>
Thomas Nagy <email>tnagy2^8@yahoo.fr</email>
</para></listitem>
</itemizedlist>
<!-- TRANS:CREDIT_FOR_TRANSLATORS -->
&underFDL; <!-- FDL: do not remove -->
&underGPL; <!-- GPL License -->
</chapter>
<appendix id="installation">
<title>Installation</title>
<sect1 id="getting-kalzium">
<title>How to obtain &kalzium;</title>
&install.intro.documentation;
</sect1>
<sect1 id="requirements">
<title>Requirements</title>
<para>
&kalzium; itself can be found on <ulink
url="http://edu.kde.org/kalzium">The &kalzium; home page</ulink> and
is part of the &kde;-Edu project</para>
<para>You can find a list of changes in the file
<filename>ChangeLog</filename> in the distribution of
&kalzium;.</para>
</sect1>
<sect1 id="compilation">
<title>Compilation and Installation</title>
&install.compile.documentation;
</sect1>
</appendix>
&documentation.index;
</book>
<!--
Local Variables:
mode: sgml
sgml-minimize-attributes:nil
sgml-general-insert-case:lower
sgml-indent-step:0
sgml-indent-data:nil
End:
// vim:ts=2:sw=2:tw=78:noet:noai
-->
|